euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

134 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1822 chr1 75192898 75192898 - unknown germline . no 244 CRYZ
srip2816 chr1 101978986 101978986 . unknown germline . no 244 .
srip4123 chr1 149308428 149308428 + unknown germline . no 244 LOC645262
srip6847 chr1 221827812 221827812 - unknown germline . no 244 .
srip7768 chr10 16031588 16031588 + unknown germline . no 244 .
srip8471 chr10 25707693 25707693 - unknown germline . no 244 GPR158
srip11827 chr10 124455224 124455224 + unknown germline . no 244 .
srip12239 chr11 6812374 6812374 + unknown germline . no 244 .
srip12800 chr11 25123346 25123346 - unknown germline . no 244 .
srip14257 chr11 41831803 41831803 . unknown germline . no 244 .
srip17172 chr11 94684368 94684368 + unknown germline . no 244 .
srip18476 chr11 123241793 123241793 + unknown germline . no 244 .
srip19250 chr11 134305645 134305645 - unknown germline . no 244 .
srip19881 chr12 11219195 11219195 - unknown germline . no 244 PRH1-PRR4
srip20139 chr12 12933687 12933687 - unknown germline . no 244 APOLD1
srip20468 chr12 25775847 25775847 - unknown germline . no 244 IFLTD1
srip20750 chr12 28226420 28226420 - unknown germline . no 244 .
srip22204 chr12 43256979 43256979 - unknown germline . no 244 .
srip23139 chr12 66451382 66451382 . unknown germline . no 244 .
srip24900 chr12 85506283 85506283 + unknown germline . no 244 LRRIQ1
srip25540 chr12 117814444 117814444 - unknown germline . no 244 .
srip26910 chr13 22489798 22489798 + unknown germline . no 244 .
srip27358 chr13 27488117 27488117 + unknown germline . no 244 .
srip27998 chr13 42771396 42771396 + unknown germline . no 244 DGKH
srip29073 chr13 61462340 61462340 - unknown germline . no 244 .
srip29652 chr13 61734491 61734491 . unknown germline . no 244 .
srip30971 chr13 79259790 79259790 - unknown germline . no 244 .
srip31577 chr13 85871607 85871607 - unknown germline . no 244 .
srip33527 chr13 104296230 104296230 - unknown germline . no 244 .
srip35211 chr14 28301256 28301256 + unknown germline . no 244 .
srip35334 chr14 30525250 30525250 . unknown germline . no 244 .
srip35855 chr14 36674752 36674752 + unknown germline . no 244 .
srip38137 chr14 71197788 71197788 + unknown germline . no 244 MAP3K9
srip38625 chr14 86381803 86381803 - unknown germline . no 244 .
srip39070 chr15 22574170 22574170 + unknown germline . no 244 .
srip39336 chr15 28175795 28175795 - unknown germline . no 244 OCA2
srip39525 chr15 34031845 34031845 - unknown germline . no 244 RYR3
srip39732 chr15 37707890 37707890 - unknown germline . no 244 .
srip42259 chr15 77910870 77910870 . unknown germline . no 244 LINGO1
srip43260 chr15 100931152 100931152 - unknown germline . no 244 .
srip45512 chr16 33992437 33992437 . unknown germline . no 244 .
srip46311 chr16 71028016 71028016 + unknown germline . no 244 HYDIN
srip47702 chr17 32813627 32813627 + unknown germline . no 244 .
srip48980 chr18 15095255 15095255 - unknown germline . no 244 .
srip50755 chr18 51762737 51762737 - unknown germline . no 244 .
srip50834 chr18 54608049 54608049 + unknown germline . no 244 WDR7
srip51835 chr18 74960069 74960069 - unknown germline . no 244 .
srip52168 chr19 24571983 24571983 - unknown germline . no 244 .
srip52749 chr2 6798282 6798282 - unknown germline . no 244 .
srip53459 chr2 23191008 23191008 - unknown germline . no 244 .
srip53924 chr2 35879348 35879348 + unknown germline . no 244 .
srip54260 chr2 36570259 36570259 - unknown germline . no 244 .
srip55187 chr2 66635881 66635881 - unknown germline . no 244 .
srip56218 chr2 82098035 82098035 + unknown germline . no 244 .
srip56865 chr2 106163161 106163161 + unknown germline . no 244 .
srip57735 chr2 129573979 129573979 + unknown germline . no 244 .
srip58244 chr2 141852915 141852915 - unknown germline . no 244 LRP1B
srip58564 chr2 144010786 144010786 + unknown germline . no 244 ARHGAP15
srip59208 chr2 147020925 147020925 + unknown germline . no 244 .
srip59618 chr2 156527835 156527835 + unknown germline . no 244 .
srip60386 chr2 180416213 180416213 . unknown germline . no 244 ZNF385B
srip61927 chr2 221278227 221278227 - unknown germline . no 244 .
srip62634 chr2 235519802 235519802 + unknown germline . no 244 .
srip63058 chr20 7292193 7292193 + unknown germline . no 244 .
srip64044 chr20 25895497 25895497 - unknown germline . no 244 .
srip65124 chr20 50967361 50967361 - unknown germline . no 244 .
srip65858 chr21 19517305 19517305 - unknown germline . no 244 .
srip71903 chr3 38626071 38626071 + unknown germline . no 244 SCN5A
srip73381 chr3 59852896 59852896 + unknown germline . no 244 FHIT
srip73800 chr3 75101217 75101217 + unknown germline . no 244 .
srip74445 chr3 80590169 80590169 - unknown germline . no 244 .
srip75589 chr3 85576556 85576556 + unknown germline . no 244 CADM2
srip77260 chr3 123590719 123590719 + unknown germline . no 244 MYLK
srip78663 chr3 151148550 151148550 - unknown germline . no 244 MED12L
srip81476 chr3 186372132 186372132 + unknown germline . no 244 .
srip82107 chr3 193354172 193354172 - unknown germline . no 244 OPA1
srip82671 chr4 15872175 15872175 - unknown germline . no 244 .
srip83938 chr4 32065895 32065895 - unknown germline . no 244 .
srip84022 chr4 37952111 37952111 - unknown germline . no 244 TBC1D1
srip84690 chr4 47007786 47007786 - unknown germline . no 244 .
srip86215 chr4 66413933 66413933 . unknown germline . no 244 EPHA5
srip88898 chr4 103343749 103343749 + unknown germline . no 244 .
srip90352 chr4 115132699 115132699 + unknown germline . no 244 .
srip92808 chr4 138177329 138177329 + unknown germline . no 244 .
srip93734 chr4 157447968 157447968 + unknown germline . no 244 .
srip93877 chr4 158907280 158907280 - unknown germline . no 244 .
srip94641 chr4 174035603 174035603 + unknown germline . no 244 .
srip95449 chr4 190969819 190969819 + unknown germline . no 244 .
srip96079 chr5 8749521 8749521 + unknown germline . no 244 .
srip96286 chr5 11391269 11391269 + unknown germline . no 244 CTNND2
srip97234 chr5 26093147 26093147 + unknown germline . no 244 .
srip97762 chr5 33633341 33633341 . unknown germline . no 244 ADAMTS12
srip98060 chr5 33797550 33797550 - unknown germline . no 244 ADAMTS12
srip100729 chr5 89450775 89450775 + unknown germline . no 244 .
srip101087 chr5 96866415 96866415 + unknown germline . no 244 .
srip102508 chr5 109567533 109567533 + unknown germline . no 244 .
srip105262 chr5 155619871 155619871 . unknown germline . no 244 .
srip105813 chr5 164495145 164495145 - unknown germline . no 244 LOC100507193
srip107527 chr6 13503042 13503042 + unknown germline . no 244 .
srip108706 chr6 46310298 46310298 + unknown germline . no 244 .
srip109132 chr6 57494221 57494221 - unknown germline . no 244 PRIM2
srip109168 chr6 58481772 58481772 - unknown germline . no 244 .
srip111034 chr6 77980645 77980645 - unknown germline . no 244 .
srip112053 chr6 91669514 91669514 - unknown germline . no 244 .
srip112705 chr6 102283763 102283763 - unknown germline . no 244 GRIK2
srip114435 chr6 148163583 148163583 + unknown germline . no 244 .
srip114767 chr6 148195798 148195798 + unknown germline . no 244 .
srip115680 chr6 162181262 162181262 + unknown germline . no 244 PARK2
srip117633 chr7 53652509 53652509 - unknown germline . no 244 .
srip118330 chr7 63749896 63749896 + unknown germline . no 244 .
srip119675 chr7 84901723 84901723 - unknown germline . no 244 .
srip120254 chr7 85044744 85044744 . unknown germline . no 244 .
srip121757 chr7 107829256 107829256 + unknown germline . no 244 NRCAM
srip122006 chr7 108325669 108325669 + unknown germline . no 244 .
srip124391 chr8 5829282 5829282 - unknown germline . no 244 .
srip126881 chr8 67381884 67381884 - unknown germline . no 244 .
srip128068 chr8 84573970 84573970 + unknown germline . no 244 .
srip128270 chr8 87315042 87315042 + unknown germline . no 244 .
srip129129 chr8 115788572 115788572 - unknown germline . no 244 .
srip130134 chr8 131041227 131041227 + unknown germline . no 244 .
srip131363 chr9 7741401 7741401 + unknown germline . no 244 .
srip133414 chr9 32463891 32463891 - unknown germline . no 244 DDX58
srip133606 chr9 34288202 34288202 . unknown germline . no 244 KIF24
srip133632 chr9 34904794 34904794 - unknown germline . no 244 .
srip133959 chr9 72777416 72777416 - unknown germline . no 244 LOC100507244;MAMDC2
srip135890 chr9 118083873 118083873 . unknown germline . no 244 DEC1
srip136274 chrX 4659603 4659603 - unknown germline . no 244 .
srip137249 chrX 54917144 54917144 + unknown germline . no 244 .
srip137353 chrX 55264659 55264659 - unknown germline . no 244 .
srip139454 chrX 86500636 86500636 - unknown germline . no 244 .
srip140090 chrX 102363181 102363181 . unknown germline . no 244 .
srip140806 chrX 119892837 119892837 - unknown germline . no 244 .
srip141383 chrX 129525275 129525275 - unknown germline . no 244 .
srip142285 chrY 13490336 13490336 . unknown germline . no 244 .